[Dissertation / PhD Thesis]
Rohe, Peter
Prozessnahe Hochdurchsatzoptimierung der heterologen Proteinproduktion in alternativen Wirtsorganismen
In: Schriften des Forschungszentrums Jülich : Reihe Gesundheit 58, 2012

[Dissertation / PhD Thesis]
Niedenführ, Sebastian
Analyzing the fluxome of P. chrysogenum in an industrial environment : workflows for 13 C metabolic flux analysis in complex systems
, 2014

[Dissertation / PhD Thesis]
Jussen, Daniel
Development and characterization of a microfluidic magnetic oscillation reactor for enzymes
In: Schriften des Forschungszentrums Jülich : Reihe Schlüsseltechnologien 86, 2014

[Dissertation / PhD Thesis]
Püttmann, Andreas
High performance finite element methods for three-dimensional chromatography models
In: Berichte aus der Verfahrenstechnik, 2015

[Book, Dissertation / PhD Thesis]
Grünberger, Alexander
Single cell analysis of microbial production strains in microfluidic bioreactors
In: Schriften des Forschungszentrums Jülich : Reihe Schlüsseltechnologien 114, 2015

[Poster]
Ebert, Birgitta Elisabeth; Nöh, Katharina; Wiechert, Wolfgang; Blank, Lars M.
HiQFlux: Quantifying metabolic network operation in compartmentalized organisms - yeast as a eukaryotic model
In: BioSC Forum Köln 2016-11-22 - 2016-11-22, 2016

[Dissertation / PhD Thesis]
von Haugwitz, Max
Mass spectrometric data processing for metabolomics and fluxomics : a flexible evaluation framework with quality awareness
, 2016

[Dissertation / PhD Thesis]
Helfrich, Stefan
High-throughput live-cell imaging for investigations of cellular heterogeneity in Corynebacterium glutamicum
In: Schriften des Forschungszentrums Jülich. Reihe Schlüsseltechnologien 130, 2016

[Dissertation / PhD Thesis]
Unthan, Simon
Robot-assisted phenotyping of genome-reduced Corynebacterium glutamicum strain libraries to draft a chassis organism
In: Schriften des Forschungszentrums Jülich. Reihe Schlüsseltechnologien / Key Technologies 132, 2016

[Poster]
Lamm, Robin; Jaeger, Vera D.; Kloß, Ramona; Pohl, Martina; Krauss, Ulrich; Jaeger, Karl-Erich; Büchs, Jochen
Catalytically active Inclusion bodies: Application Of High-throughput Cultivation Technologies To Study Innovative Enzyme Aggregates
In: High Throughput Process Development Conference Toledo 2017-10-09 - 2017-10-12, 2017

[Poster]
Beyß, Martin; Weber, Dieter; Blank, Lars M.; Wiechert, Wolfgang; Ebert, Birgitta Elisabeth; Nöh, Katharina
HiQFlux: Quantifying metabolic network operation in compartmentalized organisms - yeast as a eukaryotic model
In: BioSC Symposium Cologne 2017-11-22 - 2017-11-22, 2017

[Dissertation / PhD Thesis]
Limberg, Michael H.
Engineering of Scale-Down Bioreactor Setup: Deciphering Metabolic Phenotype of Corynebacterium glutamicum under Simulated Bioreactor Inhomogeneity
, 2017
[DOI: 10.18154/RWTH-2017-09436]

[Journal Article, Multimedia]
Hemmerich, Johannes; Freier, Lars; Wiechert, Wolfgang; von Lieres und Wilkau, Eric; Oldiges, Marco
Generic Protocol for Optimization of Heterologous Protein Production Using Automated Microbioreactor Technology
In: Journal of visualized experiments, 313 (130), 56234, 2017
[DOI: 10.3791/56234]

[Book]
Bott, Michael (Editor); Jaeger, Karl-Erich (Editor); Pietruszka, Jörg (Editor); Wiechert, Wolfgang (Editor)
40 Years of Biotechnology Research at Forschungszentrum Jülich
In: Journal of biotechnology, 258, 210 Seiten, 2017

[Journal Article]
Binder, Dennis; Drepper, Thomas; Jaeger, Karl-Erich; Delvigne, Frank; Wiechert, Wolfgang; Kohlheyer, Dietrich; Grünberger, Alexander
Homogenizing bacterial cell factories : Analysis and engineering of phenotypic heterogeneity
In: Metabolic engineering, 42, 145-156, 2017
[DOI: 10.1016/j.ymben.2017.06.009]

[Contribution to a book, Contribution to a conference proceedings]
Oeggl, Reinhard; Wachtmeister, Jochen; Erdmann, Vanessa; Kulig, Justyna; Sehl, Torsten; Jakoblinnert, Andre; Rother, Dörte
Atom- and step efficient modular synthetic enzyme cascades to chiral building blocks and active pharmaceutical ingredients
In: Chemistry's impact on the global economy : 254th American Chemical Society National Meeting & Exposition : August 20-24, 2017, Washington, DC / ACS, 196, 2017

[Contribution to a book, Journal Article]
Hemmerich, Johannes; Tenhaef, Niklas; Steffens, Carmen; Kappelmann, Jannick; Weiske, Marc; Reich, Sebastian J.; Wiechert, Wolfgang; Oldiges, Marco; Noack, Stephan
Less Sacrifice, More Insight: Repeated Low-Volume Sampling of Microbioreactor Cultivations Enables Accelerated Deep Phenotyping of Microbial Strain Libraries
In: Biotechnology journal, 14 (9), 1800428, 2018
[DOI: 10.1002/biot.201800428]

[Journal Article]
Hemmerich, Johannes; Moch, Matthias; Jurischka, Sarah; Wiechert, Wolfgang; Freudl, Roland; Oldiges, Marco
Combinatorial impact of Sec signal peptides from Bacillus subtilis and bioprocess conditions on heterologous cutinase secretion by Corynebacterium glutamicum
In: Biotechnology & bioengineering, 116 (3), 644-655, 2018
[DOI: 10.1002/bit.26873]

[Journal Article]
Burmeister, Alina; Hilgers, Fabienne; Langner, Annika; Westerwalbesloh, Christoph; Kerkhoff, Yannic; Tenhaef, Niklas; Drepper, Thomas; Kohlheyer, Dietrich; von Lieres und Wilkau, Eric; Noack, Stephan; Grünberger, Alexander
A microfluidic co-cultivation platform to investigate microbial interactions at defined microenvironments
In: Lab on a chip, 19 (1), 98-110, 2018
[DOI: 10.1039/C8LC00977E]

[Poster]
Weber, Dieter; Beyß, Martin; Mampel, Jörg; Wiechert, Wolfgang; Blank, Lars M.; Nöh, Katharina; Ebert, Birgitta Elisabeth
Application of Mass Spectrometry-based Metabolomics and Fluxomics for Biotechnological Strain Improvement
In: 19. Intenational Conference on Systems Biology Lyon 2018-10-28 - 2018-11-01, 2018

[Journal Article]
Koepff, Joachim; Sachs, Christian Carsten; Wiechert, Wolfgang; Kohlheyer, Dietrich; Nöh, Katharina; Oldiges, Marco; Grünberger, Alexander
Germination and Growth Analysis of Streptomyces lividans at the Single-Cell Level Under Varying Medium Compositions
In: Frontiers in microbiology, 9, 2680, 2018
[DOI: 10.3389/fmicb.2018.02680]

[Journal Article]
Oeggl, Reinhard; Maßmann, Tim; Jupke, Andreas; Rother, Dörte
Four Atom Efficient Enzyme Cascades for All 4-Methoxyphenyl-1,2-propanediol Isomers Including Product Crystallization Targeting High Product Concentrations and Excellent E -Factors
In: ACS sustainable chemistry & engineering, 6 (9), 11819-11826, 2018
[DOI: 10.1021/acssuschemeng.8b02107]

[Dissertation / PhD Thesis]
He, Qiaole
Advanced system simulation, parameter estimation and process design in preparative chromatography
, 2018
[DOI: 10.18154/RWTH-2018-228096]

[Dissertation / PhD Thesis]
Kappelmann, Jannick
Tandem-mass-spectrometry-driven investigation of the anaplerotic reactions in Corynebacterium glutamicum
, 2018
[DOI: 10.18154/RWTH-2018-231115]

[Dissertation / PhD Thesis]
Sachs, Christian Carsten
Online high throughput microfluidic single cell analysis for feed-back experimentation
, 2018
[DOI: 10.18154/RWTH-2018-231907]

[Dissertation / PhD Thesis]
Loomba, Varun
Modelling and optimization of algal cultivation in lab scale flat panel Photobioreactors
, 2018
[DOI: 10.18154/RWTH-2019-05689]

[Contribution to a book, Journal Article]
Demling, Philipp; Westerwalbesloh, Christoph; Noack, Stephan; Wiechert, Wolfgang; Kohlheyer, Dietrich
Quantitative measurements in single-cell analysis: towards scalability in microbial bioprocess development
In: Current opinion in biotechnology, 54, 121-127, 2018
[DOI: 10.1016/j.copbio.2018.01.024]

[Dissertation / PhD Thesis]
Velali, Eirini
Model-based performance analysis of filtration devices and membrane adsorbers
, 2018
[DOI: 10.18154/RWTH-2019-06421]

[Journal Article]
Hage-Hülsmann, Jennifer; Grünberger, Alexander; Thies, Stephan; Santiago-Schübel, Beatrix; Klein, Andreas Sebastian; Pietruszka, Jörg; Binder, Dennis; Hilgers, Fabienne; Domröse, Andreas; Drepper, Thomas; Kohlheyer, Dietrich; Jaeger, Karl-Erich; Loeschcke, Anita
Natural biocide cocktails : Combinatorial antibiotic effects of prodigiosin and biosurfactants
In: PLOS ONE, 13 (7), e0200940, 2018
[DOI: 10.1371/journal.pone.0200940]

[Journal Article]
Pooth, Viola; Gaalen, Kathrin; Trenkamp, Sandra; Wiechert, Wolfgang; Oldiges, Marco
Comprehensive analysis of metabolic sensitivity of 1,4-butanediol producing Escherichia coli toward substrate and oxygen availability
In: Biotechnology progress, 36 (1), e2917, 2019
[DOI: 10.1002/btpr.2917]

[Journal Article]
Morschett, Holger; Jansen, Roman; Neuendorf, Christian; Moch, Matthias; Wiechert, Wolfgang; Oldiges, Marco
Parallelized microscale fed-batch cultivation in online-monitored microtiter plates : implications of media composition and feed strategies for process design and performance
In: Journal of industrial microbiology & biotechnology, 47 (1), 35-47, 2019
[DOI: 10.1007/s10295-019-02243-w]

[Contribution to a conference proceedings]
Rao, Jayghosh Subodh; Puettmann, Andreas; Behr, Marek; von Lieres und Wilkau, Eric
High Definition Simulation of Packed Bed Liquid Chromatography
In: [15th International PhD Seminar on Chromatographic Separation Science, SoCSS 2019, 2019-02-24 - 2019-02-26, Quedlinburg, Germany], 2019

[Journal Article]
Ploch, Tobias Michael; Zhao, Xiao; Hüser, Jonathan; von Lieres und Wilkau, Eric; Hannemann-Tamás, Ralf; Naumann, Uwe; Wiechert, Wolfgang; Mitsos, Alexander; Noack, Stephan
Multiscale dynamic modeling and simulation of a biorefinery
In: Biotechnology & bioengineering, 116 (10), 2561-2574, 2019
[DOI: 10.1002/bit.27099]

[Dissertation / PhD Thesis]
Oeggl, Reinhard
Reaction and process-optimization of modular synthetic enzyme cascades towards diols and hydroxy ketones meeting industrial demands
, 2019
[DOI: 10.18154/RWTH-2019-02462]

[Journal Article]
Erdmann, Vanessa; Sehl, Torsten; Frindi-Wosch, Ilona; Simon, Robert; Kroutil, Wolfgang; Rother, Dörte
Methoxamine Synthesis in a Biocatalytic 1-Pot 2-Step Cascade Approach
In: ACS catalysis, 9 (8), 7380-7388, 2019
[DOI: 10.1021/acscatal.9b01081]

[Journal Article]
Lindemann, Dorina; Westerwalbesloh, Christoph; Kohlheyer, Dietrich; Grünberger, Alexander; von Lieres und Wilkau, Eric
Microbial single-cell growth response at defined carbon limiting conditions
In: RSC Advances, 9 (25), 14040-14050, 2019
[DOI: 10.1039/C9RA02454A]

[Journal Article]
Beyß, Martin; Azzouzi, Salah; Weitzel, Michael; Wiechert, Wolfgang; Nöh, Katharina
The Design of FluxML: A Universal Modeling Language for 13C Metabolic Flux Analysis
In: Frontiers in microbiology, 10, 1022, 2019
[DOI: 10.3389/fmicb.2019.01022]

[Journal Article]
Beyß, Martin; Azzouzi, Salah; Weitzel, Michael; Wiechert, Wolfgang; Nöh, Katharina
Corrigendum: The Design of FluxML: A Universal Modeling Language for 13C Metabolic Flux Analysis
In: Frontiers in microbiology, 10, 1734, 2019
[DOI: 10.3389/fmicb.2019.01734]

[Dissertation / PhD Thesis]
Theorell, Axel
Bayesian methods for data-driven characterization of cells
, 2019
[DOI: 10.18154/RWTH-2020-00275]

[Dissertation / PhD Thesis]
Tenhaef, Niklas
Towards production of organic acids from industrial lignocellulosic substrates
, 2019
[DOI: 10.18154/RWTH-2020-00451]

[Dissertation / PhD Thesis]
Diedrich, Juliane Dorothea
Quantitative modeling and in-depth analysis of multi-state binding and buffer equilibria in chromatography
, 2019
[DOI: 10.18154/RWTH-2020-01265]

[Dissertation / PhD Thesis]
Westerwalbesloh, Christoph
Model-based and experimental evaluation of microfluidic cultivation with single-cell resolution
, 2019
[DOI: 10.18154/RWTH-2020-01400]

[Journal Article]
Hemmerich, Johannes; Labib, Mohamed; Steffens, Carmen; Reich, Sebastian J.; Weiske, Marc; Baumgart, Meike; Rückert, Christian; Ruwe, Matthias; Siebert, Daniel; Wendisch, Volker F.; Kalinowski, Jörn; Wiechert, Wolfgang; Oldiges, Marco
Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion
In: Microbial biotechnology, 10, 1751-7915.13660, 2020
[DOI: 10.1111/1751-7915.13660]

[Dissertation / PhD Thesis]
Bucher-Krämer, Christina Erna Maria
Multiplexed intracellular single-cell sensing strategies of microorganisms integrated for cultivation in microfluidic devices
, 2020
[DOI: 10.18154/RWTH-2020-03855]

[Dissertation / PhD Thesis]
Schätzle, Lisa-Katrin
Translational modeling of drug efficacy in cancer
, 2020
[DOI: 10.18154/RWTH-2020-11329]

[Journal Article]
Doeker, Moritz Paul Ferdinand; Grabowski, Laura; Rother, Dörte; Jupke, Andreas
In situ reactive extraction with oleic acid for process intensification in amine transaminase catalyzed reactions
In: Green chemistry : GC, 24 (1), 295-304, 2021
[DOI: 10.1039/D1GC03289E]

[Journal Article]
Heymann, William; Glaser, Juliane; Schlegel, Fabrice; Johnson, Will; Rolandi, Pablo; von Lieres und Wilkau, Eric
Advanced score system and automated search strategies for parameter estimation in mechanistic chromatography modeling
In: Journal of chromatography / A, 1661, 462693, 2021
[DOI: 10.1016/j.chroma.2021.462693]

[Contribution to a book, Journal Article]
Hemmerich, Johannes; Tenhaef, Niklas; Wiechert, Wolfgang; Noack, Stephan
pyFOOMB: Python framework for object oriented modeling of bioprocesses
In: Engineering in life sciences, 21 (3/4), 242-257, 2021
[DOI: 10.1002/elsc.202000088]

[Journal Article]
Rother, Dörte; Malzacher, Stephan
Computer-aided enzymatic retrosynthesis
In: Nature catalysis, 4 (2), 92-93, 2021
[DOI: 10.1038/s41929-021-00582-5]

[Journal Article]
Küsters, Kira; Pohl, Martina; Krauss, Ulrich; Ölçücü, Gizem; Albert, Sandor; Jaeger, Karl-Erich; Wiechert, Wolfgang; Oldiges, Marco
Construction and comprehensive characterization of an EcLDCc-CatIB set—varying linkers and aggregation inducing tags
In: Microbial cell factories, 20 (1), 49, 2021
[DOI: 10.1186/s12934-021-01539-w]

[Journal Article]
Weber, Douglas; Patsch, David; Neumann, Annika; Winkler, Margit; Rother, Dörte
Production of the Carboxylate Reductase from Nocardia otitidiscaviarum in a Soluble, Active Form for in vitro Applications
In: ChemBioChem : a European journal of chemical biology, 22 (10), 1823-1832, 2021
[DOI: 10.1002/cbic.202000846]

[Contribution to a book, Journal Article]
Reiter, Alexander; Herbst, Laura Marie; Wiechert, Wolfgang; Oldiges, Marco
Need for speed : evaluation of dilute and shoot-mass spectrometry for accelerated metabolic phenotyping in bioprocess development
In: Analytical and bioanalytical chemistry, 413 (12), 3253-3268, 2021
[DOI: 10.1007/s00216-021-03261-3]

[Journal Article]
Jansen, Roman; Morschett, Holger; Hasenklever, Dennis; Moch, Matthias; Wiechert, Wolfgang; Oldiges, Marco
Microbioreactor‐assisted cultivation workflows for time‐efficient phenotyping of protein producing Aspergillus niger in batch and fed‐batch mode
In: Biotechnology progress, 37 (4), e3144, 2021
[DOI: 10.1002/btpr.3144]

[Journal Article]
Gerlach, Tim; Nugroho, David Limanhadi; Rother, Dörte
The Effect of Visible Light on the Catalytic Activity of PLP‐Dependent Enzymes
In: ChemCatChem, 13 (10), 2398-2406, 2021
[DOI: 10.1002/cctc.202100163]

[Journal Article]
Zelle, E.; Pfelzer, N.; Oldiges, Marco; Koch-Koerfges, A.; Bott, M.; Nöh, K.; Wiechert, W.
An energetic profile of Corynebacterium glutamicum underpinned by measured biomass yield on ATP
In: Metabolic engineering, 65, 66-78, 2021
[DOI: 10.1016/j.ymben.2021.03.006]

[Journal Article]
van Schie, Morten M. C. H.; Spöring, Jan-Dirk; Bocola, Marco; Domínguez de María, Pablo; Rother, Dörte
Applied biocatalysis beyond just buffers : from aqueous to unconventional media. Options and guidelines
In: Green chemistry : GC, 23 (9), 3191-3206, 2021
[DOI: 10.1039/D1GC00561H]

[Journal Article]
Morschett, Holger; Tenhaef, Niklas; Hemmerich, Johannes; Herbst, Laura Marie; Spiertz, Markus; Dogan, Deniz; Wiechert, Wolfgang; Noack, Stephan; Oldiges, Marco
Robotic integration enables autonomous operation of laboratory scale stirred tank bioreactors with model-driven process analysis
In: Biotechnology & bioengineering, 118 (7), 2759-2769, 2021
[DOI: 10.1002/bit.27795]

[Journal Article]
Mack, Kevin; Doeker, Moritz Paul Ferdinand; Grabowski, Laura; Jupke, Andreas; Rother, Dörte
Extractive in situ product removal for the application of naturally produced L-alanine as an amine donor in enzymatic metaraminol production
In: Green chemistry : GC, 23 (13), 4892-4901, 2021
[DOI: 10.1039/D1GC00852H]

[Journal Article]
Tenhaef, Niklas; Kappelmann, Jannick; Eich, Arabel; Weiske, Marc; Brieß, Lisette; Brüsseler, Christian; Marienhagen, Jan; Wiechert, Wolfgang; Noack, Stephan
Microaerobic growth-decoupled production of α-ketoglutarate and succinate from xylose in a one-pot process using Corynebacterium glutamicum
In: Biotechnology journal : BTJ, 10, 2100043, 2021
[DOI: 10.1002/biot.202100043]

[Journal Article]
Müller, Carolin C.; Igwe, Chika L.; Wiechert, Wolfgang; Oldiges, Marco
Scaling production of GFP1-10 detector protein in E. coli for secretion screening by split GFP assay
In: Microbial cell factories, 20 (1), 191, 2021
[DOI: 10.1186/s12934-021-01672-6]

[Contribution to a book, Journal Article]
Siedentop, Regine; Claaßen, Christiane; Rother, Dörte; Lütz, Stephan; Rosenthal, Katrin
Getting the Most Out of Enzyme Cascades : Strategies to Optimize In Vitro Multi-Enzymatic Reactions
In: Catalysts : open access journal, 11 (10), 1183, 2021
[DOI: 10.3390/catal11101183]

[Journal Article]
Kappauf, Katrin; Majstorovic, Nikola; Agarwal, Seema; Rother, Dörte; Claaßen, Christiane
Modulation of Transaminase Activity by Encapsulation in Temperature-Sensitive Poly(N-acryloyl glycinamide) Hydrogels
In: ChemBioChem : a European journal of chemical biology, 22 (24), 3452-3461, 2021
[DOI: 10.1002/cbic.202100427]

[Journal Article]
Jansen, Roman; Küsters, Kira; Morschett, Holger; Wiechert, Wolfgang; Oldiges, Marco
A fully automated pipeline for the dynamic at‐line morphology analysis of microscale Aspergillus cultivation
In: Fungal Biology and Biotechnology, 8 (1), [1]-10, 2021
[DOI: 10.1186/s40694-021-00109-4]

[Contribution to a book, Journal Article]
Kappelmann, Jannick; Klein, Bianca; Papenfuß, Mathias; Lange, Julian; Blombach, Bastian; Takors, Ralf; Wiechert, Wolfgang; Polen, Tino; Noack, Stephan
Comprehensive Analysis of C. glutamicum Anaplerotic Deletion Mutants Under Defined d-Glucose Conditions
In: Frontiers in Bioengineering and Biotechnology, 8, 602936, 2021
[DOI: 10.3389/fbioe.2020.602936]

[Journal Article]
Beyß, Martin; Parra-Peña, Victor D.; Ramirez-Malule, Howard; Nöh, Katharina
Robustifying Experimental Tracer Design for $^{13}$C-Metabolic Flux Analysis
In: Frontiers in Bioengineering and Biotechnology, 9, 685323, 2021
[DOI: 10.3389/fbioe.2021.685323]

[Dissertation / PhD Thesis]
Kaganovitch, Eugen
Development and application of a microfluidic batch cultivation device
, 2021
[DOI: 10.18154/RWTH-2021-09799]

[Journal Article]
Feierabend, Martina; Renz, Alina; Zelle, Elisabeth; Nöh, Katharina; Wiechert, Wolfgang; Dräger, Andreas
High-Quality Genome-Scale Reconstruction of Corynebacterium glutamicum ATCC 13032
In: Frontiers in microbiology, 12, 750206, 2021
[DOI: 10.3389/fmicb.2021.750206]

[Dissertation / PhD Thesis]
Leweke, Samuel
Unified modeling and efficient simulation of chromatographic separation processes
, 2021
[DOI: 10.18154/RWTH-2022-01184]

[Dissertation / PhD Thesis]
Labib, Mohamed Mamdouh Ali Abdelmoteleb
Towards hybrid production of fine chemicals and high-value compounds
, 2021
[DOI: 10.18154/RWTH-2022-05460]

[Journal Article]
Helleckes, Laura Marie; Müller, Carolin; Griesbach, Tim; Waffenschmidt, Vera; Moch, Matthias; Osthege, Michael; Wiechert, Wolfgang; Oldiges, Marco
Explore or exploit? A model-based screening strategy for PETase secretion by Corynebacterium glutamicum
In: Biotechnology and bioengineering, 120 (1), 139-153, 2022
[DOI: 10.1002/bit.28261]

[Journal Article]
Sachs, Christian Carsten; Ruzaeva, Karina; Seiffarth, Johannes; Wiechert, Wolfgang; Berkels, Benjamin; Nöh, Katharina
CellSium: versatile cell simulator for microcolony ground truth generation
In: Bioinformatics advances, 2 (1), vbac053, 2022
[DOI: 10.1093/bioadv/vbac053]

[Contribution to a book, Contribution to a conference proceedings]
Ruzaeva, Karina; Küsters, Kira; Wiechert, Wolfgang; Berkels, Benjamin; Oldiges, Marco; Noh, Katharina
Automated Characterization of Catalytically Active Inclusion Body Production in Biotechnological Screening Systems
In: 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) / pre-conference workshops & social events: Monday, July 11, 2022, conference dates: Tuesday, July 12-Friday, July 15, 2022 / conference chair: Christopher James (University of Warwick), conference co-chair: James Patton (University of Chicago) ; programm chair: Ron Summers (Collegium Basilea), 3874-3877, 2022
[DOI: 10.1109/EMBC48229.2022.9871325]

[Journal Article]
Osthege, Michael; Tenhaef, Niklas; Zyla, Rebecca; Müller, Carolin; Hemmerich, Johannes; Wiechert, Wolfgang; Noack, Stephan; Oldiges, Marco
bletl : A Python package for integrating BioLector microcultivation devices in the Design-Build-Test-Learn cycle
In: Engineering in life sciences, 22 (3/4), 242-259, 2022
[DOI: 10.1002/elsc.202100108]

[Contribution to a book, Journal Article]
Reiter, Alexander; Asgari, Jian; Wiechert, Wolfgang; Oldiges, Marco
Metabolic Footprinting of Microbial Systems Based on Comprehensive In Silico Predictions of MS/MS Relevant Data
In: Metabolites : open access journal, 12 (3), 257, 2022
[DOI: 10.3390/metabo12030257]

[Journal Article]
Labib, Mohamed; Grabowski, Laura; Brüsseler, Christian; Kallscheuer, Nicolai; Wachtendonk, Luisa; Fuchs, Thomas Leonard; Jupke, Andreas; Wiechert, Wolfgang; Marienhagen, Jan; Rother, Dörte; Noack, Stephan
Toward the Sustainable Production of the Active Pharmaceutical Ingredient Metaraminol
In: ACS sustainable chemistry & engineering, 10 (16), 5117-5128, 2022
[DOI: 10.1021/acssuschemeng.1c08275]

[Journal Article]
Helleckes, Laura Marie; Osthege, Michael; Wiechert, Wolfgang; von Lieres und Wilkau, Eric; Oldiges, Marco
Bayesian calibration, process modeling and uncertainty quantification in biotechnology
In: PLoS Computational Biology, 18 (3), e1009223, 2022
[DOI: 10.1371/journal.pcbi.1009223]

[Journal Article]
Kuppe, Christian W.; Schnepf, Andrea; von Lieres und Wilkau, Eric; Watt, Michelle; Postma, Johannes A.
Rhizosphere models : their concepts and application to plant-soil ecosystems
In: Plant and soil, 474 (1/2), 17-55, 2022
[DOI: 10.1007/s11104-021-05201-7]

[Journal Article]
Nießer, Jochen; Müller, Moritz Fabian; Kappelmann, Jannick; Wiechert, Wolfgang; Noack, Stephan
Hot isopropanol quenching procedure for automated microtiter plate scale 13C-labeling experiments
In: Microbial cell factories, 21 (1), 78, 2022
[DOI: 10.1186/s12934-022-01806-4]

[Journal Article]
Küsters, Kira; Saborowski, Ronja; Wagner, Christian; Hamel, Rebecca; Spöring, Jan-Dirk; Wiechert, Wolfgang; Oldiges, Marco
Construction and characterization of BsGDH-CatIB variants and application as robust and highly active redox cofactor regeneration module for biocatalysis
In: Microbial cell factories, 21 (1), 108, 2022
[DOI: 10.1186/s12934-022-01816-2]

[Journal Article]
Müller, Carolin C.; Bakkes, Patrick J.; Lenz, Patrick; Waffenschmidt, Vera; Helleckes, Laura Marie; Jaeger, Karl-Erich; Wiechert, Wolfgang; Knapp, Andreas; Freudl, Roland; Oldiges, Marco
Accelerated strain construction and characterization of C. glutamicum protein secretion by laboratory automation
In: Applied microbiology and biotechnology, 106 (12), 4481-4497, 2022
[DOI: 10.1007/s00253-022-12017-7]

[Dissertation / PhD Thesis]
Weber, Douglas
Biocatalytic reduction of carboxylic acids : production and application of carboxylate reductases in synthetic enzyme cascades
, 2022
[DOI: 10.18154/RWTH-2022-10375]

[Journal Article]
von den Eichen, Nikolas; Osthege, Michael; Dölle, Michaela; Bromig, Lukas; Wiechert, Wolfgang; Oldiges, Marco; Weuster-Botz, Dirk
Control of parallelized bioreactors II: probabilistic quantification of carboxylic acid reductase activity for bioprocess optimization
In: Bioprocess and biosystems engineering, 45 (12), 1939-1954, 2022
[DOI: 10.1007/s00449-022-02797-7]

[Journal Article]
Schito, Simone; Zuchowski, Rico; Bergen, Daniel; Strohmeier, Daniel; Wollenhaupt, Bastian; Menke, Philipp; Seiffarth, Johannes; Nöh, Katharina; Kohlheyer, Dietrich; Bott, Michael; Wiechert, Wolfgang; Baumgart, Meike; Noack, Stephan
Communities of Niche-optimized Strains (CoNoS) : Design and creation of stable, genome-reduced co-cultures
In: Metabolic engineering, 73, 91-103, 2022
[DOI: 10.1016/j.ymben.2022.06.004]

[Contribution to a book, Journal Article]
Tenhaef, Niklas; Hermann, Alina; Müller, Moritz Fabian; Görtz, Jonas; Marienhagen, Jan; Oldiges, Marco; Wiechert, Wolfgang; Bott, Michael; Jupke, Andreas; Hartmann, Laura; Herres-Pawlis, Sonja; Noack, Stephan
From Microbial Succinic Acid Production to Polybutylene Bio-Succinate Synthesis 
In: Chemie - Ingenieur - Technik : CIT, 95 (4), 587-595, 2023
[DOI: 10.1002/cite.202200163]